Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82753.1Arginase; TIGRFAM: Arginase, subgroup; KEGG: dia:Dtpsy_0241 arginase; PFAM: Ureohydrolase; Belongs to the arginase family. (303 aa)    
Predicted Functional Partners:
AEB83069.1
KEGG: dia:Dtpsy_0592 ornithine cyclodeaminase; PFAM: Ornithine cyclodeaminase/mu-crystallin.
 
  
 0.965
AEB85390.1
Lysine decarboxylase; KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal.
  
 
 0.940
AEB85867.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.932
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
    
 0.928
AEB84636.1
KEGG: pol:Bpro_4416 FAD dependent oxidoreductase; manually curated; PFAM: FAD dependent oxidoreductase.
  
 
 0.917
AEB84634.1
PFAM: BFD-like [2Fe-2S]-binding domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_4414 BFD-like (2Fe-2S)-binding region.
    
 0.904
argH
TIGRFAM: Argininosuccinate lyase; KEGG: dia:Dtpsy_2664 argininosuccinate lyase; PFAM: Lyase 1, N-terminal.
     
 0.864
hutH
PFAM: Phenylalanine/histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: aav:Aave_2965 histidine ammonia-lyase.
  
  
 0.840
AEB82754.1
PFAM: Protein of unknown function DUF81; KEGG: aav:Aave_0304 hypothetical protein.
       0.820
leuS
TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: ajs:Ajs_3917 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.768
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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