STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82760.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bph:Bphy_6198 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
AEB83913.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bur:Bcep18194_C7296 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.768
AEB83632.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pol:Bpro_2067 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.763
AEB85499.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rso:RS03179 transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.761
AEB84098.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aav:Aave_2084 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.758
AEB83142.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4993 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.755
AEB83798.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0788 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.755
AEB84638.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pol:Bpro_4347 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.753
AEB82452.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: reh:H16_A2139 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.752
AEB86269.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aav:Aave_3911 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.751
AEB86935.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pna:Pnap_3816 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.743
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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