close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82774.1VanZ family protein; PFAM: VanZ-like; KEGG: ajs:Ajs_0269 VanZ family protein. (365 aa)    
Predicted Functional Partners:
AEB82775.1
KEGG: dia:Dtpsy_0265 ferredoxin-like protein.
       0.829
AEB82773.1
PFAM: Uncharacterised protein family UPF0093; KEGG: dia:Dtpsy_0263 hypothetical protein.
       0.776
AEB86707.1
PFAM: Site-specific recombinase Gcr; KEGG: ajs:Ajs_0359 putative site-specific recombinase transmembrane protein.
 
     0.749
AEB82894.1
KEGG: ajs:Ajs_0447 hypothetical protein.
 
     0.743
AEB85475.1
PFAM: Protein of unknown function DUF3619; KEGG: dia:Dtpsy_1955 putative transmembrane protein.
  
     0.733
AEB83329.1
KEGG: dia:Dtpsy_0798 hypothetical protein.
  
     0.730
AEB83831.1
Hypothetical protein; KEGG: dia:Dtpsy_1110 putative signal peptide protein.
  
     0.716
AEB84036.1
HemY domain protein; PFAM: HemY, N-terminal; KEGG: ajs:Ajs_2893 HemY domain-containing protein.
 
     0.714
AEB84502.1
PFAM: Protein of unknown function DUF748; Outer membrane protein, OmpA/MotB, C-terminal; KEGG: ajs:Ajs_1662 hypothetical protein.
  
     0.692
AEB82776.1
KEGG: dia:Dtpsy_0266 putative transmembrane protein.
       0.687
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.