STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82840.1TIGRFAM: Phage head-tail joining protein; KEGG: aav:Aave_1622 phage head-tail adaptor, putative. (86 aa)    
Predicted Functional Partners:
AEB82843.1
TIGRFAM: Bacteriophage HK022, Gp6; KEGG: bcm:Bcenmc03_1290 phage protein DNA packaging protein.
  
 
 0.897
AEB82841.1
PFAM: Integrase, catalytic core; KEGG: tin:Tint_1916 integrase catalytic region.
       0.648
AEB82842.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
       0.566
AEB83250.1
PFAM: Spherulation-specific family 4; KEGG: ajs:Ajs_0766 hypothetical protein.
   
   0.509
AEB86440.1
KEGG: dia:Dtpsy_3022 hypothetical protein.
   
   0.509
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.