STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82843.1TIGRFAM: Bacteriophage HK022, Gp6; KEGG: bcm:Bcenmc03_1290 phage protein DNA packaging protein. (91 aa)    
Predicted Functional Partners:
AEB82840.1
TIGRFAM: Phage head-tail joining protein; KEGG: aav:Aave_1622 phage head-tail adaptor, putative.
  
 
 0.897
AEB85208.1
Arylesterase; KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL.
  
 
 0.688
AEB83250.1
PFAM: Spherulation-specific family 4; KEGG: ajs:Ajs_0766 hypothetical protein.
   
 
 0.546
AEB86440.1
KEGG: dia:Dtpsy_3022 hypothetical protein.
   
 
 0.546
AEB82894.1
KEGG: ajs:Ajs_0447 hypothetical protein.
  
 
 0.489
AEB83128.1
KEGG: hse:Hsero_2760 hypothetical protein.
  
 
 0.489
AEB84158.1
PFAM: NHL repeat; KEGG: phe:Phep_1359 NHL repeat containing protein.
  
 
 0.489
AEB86764.1
Astacin; PFAM: Peptidase M12A, astacin; KEGG: cph:Cpha266_0056 peptidase M12A, astacin; SMART: Peptidase, metallopeptidase.
  
 
 0.489
AEB82842.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
       0.483
AEB82841.1
PFAM: Integrase, catalytic core; KEGG: tin:Tint_1916 integrase catalytic region.
       0.427
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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