STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82843.1TIGRFAM: Bacteriophage HK022, Gp6; KEGG: bcm:Bcenmc03_1290 phage protein DNA packaging protein. (91 aa)    
Predicted Functional Partners:
AEB82840.1
TIGRFAM: Phage head-tail joining protein; KEGG: aav:Aave_1622 phage head-tail adaptor, putative.
  
 
 0.913
AEB85208.1
Arylesterase; KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL.
  
 
 0.737
AEB84408.1
TIGRFAM: Tape measure domain; KEGG: dia:Dtpsy_3197 phage tape measure protein.
  
   0.697
AEB83318.1
KEGG: dia:Dtpsy_0787 glycerophosphodiester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase.
    
   0.650
AEB83250.1
PFAM: Spherulation-specific family 4; KEGG: ajs:Ajs_0766 hypothetical protein.
   
 
 0.556
AEB86440.1
KEGG: dia:Dtpsy_3022 hypothetical protein.
   
 
 0.556
AEB82842.1
PFAM: Transposase IS3/IS911family; KEGG: pna:Pnap_4650 transposase IS3/IS911 family protein.
       0.483
AEB82894.1
KEGG: ajs:Ajs_0447 hypothetical protein.
  
 
 0.474
AEB83128.1
KEGG: hse:Hsero_2760 hypothetical protein.
  
 
 0.474
AEB84158.1
PFAM: NHL repeat; KEGG: phe:Phep_1359 NHL repeat containing protein.
  
 
 0.474
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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