STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82856.1KEGG: pol:Bpro_2745 putative transposase. (376 aa)    
Predicted Functional Partners:
AEB82857.1
KEGG: pol:Bpro_2744 hypothetical protein.
       0.773
AEB86622.1
Hypothetical protein; KEGG: pna:Pnap_4724 transposase.
  
     0.669
AEB83372.1
PFAM: Transposase, IS4-like; KEGG: bvi:Bcep1808_6138 transposase, IS4 family protein.
 
  
 0.668
AEB86621.1
PFAM: Transposase, IS4-like; KEGG: bvi:Bcep1808_6138 transposase, IS4 family protein.
 
  
 0.668
AEB85701.1
PFAM: Transposase, IS4-like; KEGG: pol:Bpro_4722 IS4 family transposase.
 
  
 0.561
AEB85401.1
PFAM: Transposase, IS4-like; KEGG: aav:Aave_4617 transposase, IS4 family protein.
 
  
 0.485
AEB83841.1
KEGG: rle:pRL110581 putative transposase-related protein.
  
    0.463
AEB84610.1
PFAM: Transposase, IS4-like; KEGG: pna:Pnap_4647 transposase, IS4 family protein.
 
   
 0.405
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.