Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82892.1KEGG: dia:Dtpsy_0436 hemerythrin HHE cation binding domain protein. (182 aa)    
Predicted Functional Partners:
AEB82891.1
KEGG: dia:Dtpsy_0435 hypothetical protein.
 
     0.733
AEB83851.1
KEGG: ajs:Ajs_1201 amine oxidase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase.
  
     0.657
AEB82888.1
PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dia:Dtpsy_0431 PpiC-type peptidyl-prolyl cis-trans isomerase.
 
     0.645
AEB82890.1
PFAM: Nitroreductase-like; KEGG: dia:Dtpsy_0434 nitroreductase.
       0.640
AEB85329.1
KEGG: lch:Lcho_3349 hypothetical protein.
  
     0.627
AEB82889.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.617
AEB83854.1
KEGG: dia:Dtpsy_1124 squalene synthase HpnC; TIGRFAM: Squalene synthase HpnC; PFAM: Squalene/phytoene synthase.
  
     0.557
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
      0.552
AEB86343.1
PFAM: Uncharacterised conserved protein UCP019883, membrane; KEGG: dia:Dtpsy_0886 putative transmembrane protein.
 
     0.531
AEB86390.1
KEGG: dia:Dtpsy_2992 hypothetical protein.
  
     0.495
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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