Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82905.1KEGG: xau:Xaut_1974 citryl-CoA lyase; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family. (291 aa)    
Predicted Functional Partners:
AEB82906.1
Transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; KEGG: rcu:RCOM_0002820 Transcriptional regulator kdgR, putative.
       0.773
AEB84670.1
PFAM: Class II aldolase/adducin, N-terminal; KEGG: vap:Vapar_5143 putative aldolase.
   
  
 0.717
AEB82903.1
PFAM: MaoC-like dehydratase; KEGG: cti:RALTA_B1743 hypothetical protein.
 
  
 0.706
AEB82901.1
KEGG: cti:RALTA_B1741 hypothetical protein.
 
  
 0.703
AEB82904.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: vei:Veis_1585 MmgE/PrpD family protein.
  
  
 0.642
AEB82899.1
KEGG: vei:Veis_1580 citryl-CoA lyase; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family.
 
    
0.610
AEB82902.1
Butyryl-CoA dehydrogenase; KEGG: cti:RALTA_B1742 putative acyl CoA dehydrogenase oxidoreductase protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain.
  
  
 0.554
AEB82900.1
KEGG: vei:Veis_1581 formyl-CoA transferase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.553
AEB82907.1
Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: dia:Dtpsy_0444 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation.
       0.523
AEB82977.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4030 hypothetical protein.
  
  
 0.430
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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