Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB82977.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_4030 hypothetical protein. (134 aa)    
Predicted Functional Partners:
AEB82978.1
KEGG: dia:Dtpsy_0515 hypothetical protein.
       0.773
AEB82976.1
PFAM: Protein of unknown function DUF185; KEGG: dia:Dtpsy_0510 protein of unknown function DUF185.
       0.686
AEB82590.1
KEGG: dia:Dtpsy_0137 hypothetical protein.
  
  
 0.594
AEB83917.1
KEGG: bbr:BB0622 hypothetical protein.
  
  
 0.594
AEB82979.1
ROK family protein; PFAM: ROK; KEGG: ajs:Ajs_0500 glucokinase.
 
   
 0.574
AEB82975.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bge:BC1002_2951 short-chain dehydrogenase/reductase SDR.
  
 
 0.555
AEB86236.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: nmg:Nmag_3457 MmgE/PrpD family protein.
 
  
 0.538
AEB82904.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: vei:Veis_1585 MmgE/PrpD family protein.
 
  
 0.513
AEB86258.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: vei:Veis_4268 MmgE/PrpD family protein.
 
  
 0.513
AEB83901.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: bur:Bcep18194_C6759 MmgE/PrpD.
 
  
 0.511
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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