STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82980.1KEGG: ajs:Ajs_0501 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: Glycosyl transferase, family 20. (463 aa)    
Predicted Functional Partners:
AEB82982.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.999
AEB82981.1
PFAM: Glycoside hydrolase 15-related; KEGG: ajs:Ajs_0502 glycoside hydrolase 15-related.
 
   
 0.965
AEB84029.1
TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: dia:Dtpsy_2383 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
    
 0.924
AEB82858.1
UDP-glucuronate 5'-epimerase; KEGG: dia:Dtpsy_0401 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
     
 0.805
AEB83623.1
KEGG: ctt:CtCNB1_1949 putative serine protein kinase, PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA.
   
  
 0.593
AEB83397.1
KEGG: dia:Dtpsy_2837 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria.
   
  
 0.572
AEB84046.1
Catalase; KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; Belongs to the catalase family.
   
  
 0.567
AEB82983.1
TIGRFAM: Thioredoxin; Zinc finger/thioredoxin putative; KEGG: dia:Dtpsy_0520 thioredoxin; PFAM: Thioredoxin domain.
     
 0.552
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
   
    0.499
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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