STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82987.1KEGG: axy:AXYL_01758 hypothetical protein. (106 aa)    
Predicted Functional Partners:
AEB82986.1
KEGG: vei:Veis_3993 hypothetical protein.
 
     0.948
AEB82988.1
KEGG: vei:Veis_3991 hypothetical protein.
       0.703
AEB86854.1
NAD/NADP octopine/nopaline dehydrogenase; PFAM: Opine dehydrogenase; Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: vap:Vapar_0420 NAD/NADP octopine/nopaline dehydrogenase.
 
    0.478
AEB82985.1
Sigma54 specific transcriptional regulator, Fis family; KEGG: axy:AXYL_01756 acetoacetate metabolism regulatory protein AtoC; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core.
     
 0.452
AEB82655.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10.
  
 
 
 0.420
AEB82732.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10.
  
 
 
 0.413
AEB85999.1
Manually curated; HAMAP: Transcriptional coactivator/pterin dehydratase; KEGG: dia:Dtpsy_2696 transcriptional coactivator/pterin dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase.
  
  
 0.406
AEB82457.1
KEGG: reh:H16_A2144 propionyl-CoA carboxylase beta chain; PFAM: Carboxyl transferase.
  
  
 0.402
AEB82616.1
KEGG: axy:AXYL_05145 methylcrotonoyl-CoA carboxylase subunit beta; PFAM: Carboxyl transferase.
  
  
 0.402
AEB84020.1
Methylcrotonoyl-CoA carboxylase; KEGG: pol:Bpro_5271 carboxyl transferase; PFAM: Carboxyl transferase.
  
  
 0.402
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.