Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82992.1PFAM: Lytic transglycosylase-like, catalytic; KEGG: dia:Dtpsy_0525 lytic transglycosylase catalytic. (660 aa)    
Predicted Functional Partners:
AEB82991.1
KEGG: dia:Dtpsy_0524 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
 
     0.715
AEB84036.1
HemY domain protein; PFAM: HemY, N-terminal; KEGG: ajs:Ajs_2893 HemY domain-containing protein.
 
     0.580
AEB84501.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: dia:Dtpsy_2043 lytic transglycosylase catalytic.
 
   
 0.563
AEB85506.1
PFAM: Lytic transglycosylase-like, catalytic; MLTD-N; Peptidoglycan-binding lysin domain; KEGG: ajs:Ajs_1742 lytic transglycosylase, catalytic.
 
  
 0.559
AEB85016.1
KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein.
 
    0.525
AEB82837.1
KEGG: ajs:Ajs_3893 hypothetical protein.
  
     0.521
AEB82990.1
PFAM: Glutathione S-transferase, N-terminal; KEGG: ajs:Ajs_0507 glutathione S-transferase domain-containing protein.
       0.521
AEB85966.1
KEGG: ajs:Ajs_3321 hypothetical protein.
  
     0.504
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
  
 0.492
AEB86142.1
Ribonuclease II; KEGG: ajs:Ajs_3654 ribonuclease II; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R.
 
     0.489
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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