Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82996.1KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent dehydrogenase. (365 aa)    
Predicted Functional Partners:
AEB82995.1
HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: ajs:Ajs_0512 putative hydroxylase; SMART: Prolyl 4-hydroxylase, alpha subunit.
 
  
 0.882
AEB82997.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor.
 
    0.817
AEB86929.1
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.637
AEB82871.1
PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: dia:Dtpsy_0414 aminotransferase class V.
  
 0.632
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
 0.632
AEB83324.1
PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich domain; KEGG: dia:Dtpsy_0793 FAD linked oxidase domain protein.
  
 0.627
AEB82994.1
Hypothetical protein; KEGG: dia:Dtpsy_0527 putative signal peptide protein.
       0.538
AEB82993.1
KEGG: ajs:Ajs_0510 cytochrome b561.
       0.534
AEB83847.1
D-lactate dehydrogenase (cytochrome); KEGG: dia:Dtpsy_1117 FAD linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
 
 0.521
AEB86570.1
PFAM: Protein of unknown function DUF81; KEGG: har:HEAR3236 hypothetical protein.
 
    0.470
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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