Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82997.1PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor. (762 aa)    
Predicted Functional Partners:
AEB82995.1
HAMAP: PKHD-type hydroxylase ybiX; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: ajs:Ajs_0512 putative hydroxylase; SMART: Prolyl 4-hydroxylase, alpha subunit.
 
  
 0.980
AEB82996.1
KEGG: ajs:Ajs_0513 (S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent dehydrogenase.
 
    0.817
AEB86071.1
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
    0.787
AEB83956.1
KEGG: rme:Rmet_1349 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer, TrbG/VirB9/CagX.
   
    0.730
AEB83955.1
Conjugation TrbI family protein; PFAM: Type IV secretion system, VirB10 / TraB / TrbI; KEGG: pap:PSPA7_3697 conjugation TrbI family protein.
   
    0.661
AEB85975.1
PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: dia:Dtpsy_2686 TonB-dependent receptor plug.
 
  
 0.564
AEB85572.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dia:Dtpsy_1842 TonB-dependent receptor.
 
  
 0.554
AEB85980.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dia:Dtpsy_2688 TonB-dependent receptor.
 
  
 0.552
AEB83961.1
KEGG: pap:PSPA7_3703 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, central domain; SMART: ATPase, AAA+ type, core.
   
    0.519
AEB84187.1
TIGRFAM: Conjugative transfer ATPase, PFL4706; KEGG: tmz:Tmz1t_0948 hypothetical protein.
   
    0.519
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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