STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83021.1Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dia:Dtpsy_0551 transcriptional regulator, TetR family. (225 aa)    
Predicted Functional Partners:
AEB83022.1
KEGG: dia:Dtpsy_0552 poly(hydroxyalkanoate) granule-associated protein; TIGRFAM: Poly granule associated; PFAM: Poly granule associated.
 
     0.849
AEB83787.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: dia:Dtpsy_1074 alpha/beta hydrolase fold protein.
 
   
 0.631
AEB86146.1
PFAM: O-antigen ligase-related; KEGG: dia:Dtpsy_2960 O-antigen polymerase.
  
     0.566
AEB82908.1
PFAM: Acyl-CoA-binding protein, ACBP; KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP.
 
     0.457
AEB86614.1
KEGG: dia:Dtpsy_3161 hypothetical protein.
  
     0.441
AEB83050.1
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dia:Dtpsy_0570 transcriptional regulator, TetR family.
  
     0.435
AEB84804.1
ZipA FtsZ-binding region protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
   
 0.418
AEB83026.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
   
 
 0.413
AEB87006.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.401
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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