STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83036.1PFAM: Fimbrial assembly; KEGG: aav:Aave_4153 fimbrial assembly family protein. (337 aa)    
Predicted Functional Partners:
AEB83034.1
KEGG: vei:Veis_0683 general secretion pathway protein J.
 
  
 0.956
AEB83032.1
KEGG: dac:Daci_1302 general secretion pathway protein H.
 
   
 0.945
AEB83167.1
PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L.
     
 0.908
AEB83035.1
Hypothetical protein; KEGG: eba:ebA1612 general secretory pathway protein K.
 
  
 0.887
AEB83213.1
PFAM: Fimbrial assembly; KEGG: ajs:Ajs_0731 fimbrial assembly family protein.
  
 
 0.887
AEB83033.1
KEGG: aav:Aave_4156 general secretion pathway protein I.
  
  
 0.796
AEB83031.1
KEGG: aav:Aave_4158 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal.
 
  
 0.790
AEB83037.1
PFAM: General secretion pathway protein M; KEGG: vei:Veis_0680 general secretion pathway protein M.
       0.781
AEB83038.1
Hypothetical protein.
       0.779
AEB83030.1
PFAM: Type II secretion system F domain; KEGG: eba:ebA1619 general secretion pathway protein F.
   
 
 0.757
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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