Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEB83037.1PFAM: General secretion pathway protein M; KEGG: vei:Veis_0680 general secretion pathway protein M. (182 aa)    
Predicted Functional Partners:
AEB83166.1
PFAM: General secretion pathway M protein; KEGG: ajs:Ajs_0669 hypothetical protein.
     
  0.900
AEB83033.1
KEGG: aav:Aave_4156 general secretion pathway protein I.
       0.781
AEB83034.1
KEGG: vei:Veis_0683 general secretion pathway protein J.
       0.781
AEB83035.1
Hypothetical protein; KEGG: eba:ebA1612 general secretory pathway protein K.
       0.781
AEB83036.1
PFAM: Fimbrial assembly; KEGG: aav:Aave_4153 fimbrial assembly family protein.
       0.781
AEB83032.1
KEGG: dac:Daci_1302 general secretion pathway protein H.
       0.780
AEB83038.1
Hypothetical protein.
       0.779
AEB83031.1
KEGG: aav:Aave_4158 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal.
       0.685
AEB83025.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.612
AEB83026.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.612
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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