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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83041.1PFAM: Glycosyl transferase, group 1; KEGG: dbr:Deba_0993 glycosyl transferase group 1. (387 aa)    
Predicted Functional Partners:
AEB83043.1
Teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; KEGG: vei:Veis_0673 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.758
AEB83042.1
PFAM: ABC-2 type transporter; KEGG: mag:amb1063 ABC-type polysaccharide/polyol phosphate export systems.
 
  
 0.740
AEB86525.1
Glycosyl transferase family 2; KEGG: psa:PST_1402 hypothetical protein; manually curated; PFAM: Glycosyl transferase, family 2; Capsule polysaccharide biosynthesis.
 
  
 0.680
AEB83026.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.658
AEB86635.1
Peptidase S15; KEGG: cwo:Cwoe_3936 peptidase S15.
   
 
 0.631
AEB83044.1
Hypothetical protein.
     
 0.606
AEB83045.1
PFAM: Methyltransferase type 11; KEGG: azl:AZL_f01750 hypothetical protein.
     
 0.606
AEB83047.1
PFAM: Glycosyl transferase, family 4; KEGG: vei:Veis_1227 glycosyl transferase family protein.
  
  
 0.544
AEB83046.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: rso:RSc0977 putative transglycosylase signal peptide protein.
       0.539
AEB83025.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.513
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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