Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB83124.1PFAM: Glycosyl transferase, family 2; KEGG: tkm:TK90_2524 glycosyl transferase family 2. (315 aa)    
Predicted Functional Partners:
AEB83125.1
PFAM: Polysaccharide biosynthesis protein; KEGG: nwa:Nwat_1744 polysaccharide biosynthesis protein.
 
  
 0.849
AEB83132.1
TIGRFAM: Hydrolase, ortholog 2, exosortase system type 1 associated; KEGG: app:CAP2UW1_4344 hydrolase, exosortase system type 1 associated.
 
     0.788
AEB83105.1
KEGG: rfr:Rfer_0658 polysaccharide export protein; TIGRFAM: PEP-CTERM, putative polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain.
 
  
 0.759
AEB83496.1
TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Sugar transferase, PEP-CTERM system associated; KEGG: rfr:Rfer_0702 undecaprenyl-phosphate galactosephosphotransferase; PFAM: Bacterial sugar transferase.
 
  
 0.752
AEB83399.1
PFAM: Protein of unknown function DUF1328; KEGG: dia:Dtpsy_2834 hypothetical protein.
   
  
 0.693
AEB83138.1
KEGG: rfr:Rfer_0705 tetratricopeptide TPR_2; TIGRFAM: PEP-CTERM system TPR-repeat lipoprotein, putative; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; Tetratricopeptide TPR-1.
 
   
 0.643
AEB83106.1
Manually curated; TIGRFAM: PEP-CTERM locus polysaccharide chain length determinant; KEGG: rfr:Rfer_0659 lipopolysaccharide biosynthesis; PFAM: Lipopolysaccharide biosynthesis.
 
  
 0.640
AEB83120.1
Wzy family polymerase, exosortase system type 1 associated; TIGRFAM: Conserved hypothetical protein CHP03097, O-antigen ligase-related; KEGG: hse:Hsero_2764 O-antigen polymerase.
 
  
 0.637
AEB83117.1
PFAM: Glycosyl transferase, group 1; KEGG: hse:Hsero_2751 glycosyltransferase 1 protein.
 
 
 0.631
AEB83107.1
Manually curated; KEGG: app:CAP2UW1_1413 non-specific protein-tyrosine kinase.
 
  
 0.630
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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