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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83127.1Manually curated; TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: reu:Reut_B5375 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (425 aa)    
Predicted Functional Partners:
AEB83126.1
UDP-glucose 4-epimerase; KEGG: pol:Bpro_3996 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
 
 
 0.993
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
  
 
 0.938
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
  0.906
lpxA
Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
    
 0.829
AEB83047.1
PFAM: Glycosyl transferase, family 4; KEGG: vei:Veis_1227 glycosyl transferase family protein.
  
  
 0.828
AEB83693.1
Glutamine--scyllo-inositol transaminase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.827
AEB83125.1
PFAM: Polysaccharide biosynthesis protein; KEGG: nwa:Nwat_1744 polysaccharide biosynthesis protein.
  
  
 0.741
AEB83699.1
PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: pol:Bpro_3983 polysaccharide biosynthesis protein CapD.
 
  
 0.682
AEB83104.1
TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: rfr:Rfer_0711 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
   
 0.636
AEB83115.1
Sugar transferase, PEP-CTERM/EpsH1 system associated; KEGG: rfr:Rfer_0668 glycosyl transferase, group 1; TIGRFAM: Sugar transferase, PEP-CTERM, Stp2; PFAM: Glycosyl transferase, group 1.
 
  
 0.614
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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