STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83179.1Porin; KEGG: aav:Aave_0932 porin. (346 aa)    
Predicted Functional Partners:
AEB83180.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type.
 
  
  0.892
AEB86111.1
NlpBDapX family lipoprotein; PFAM: Lipoprotein, NlpB; KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein.
  
   
 0.733
AEB86913.1
KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane.
  
     0.671
AEB83934.1
PFAM: Porin, Gram-negative type; KEGG: bcm:Bcenmc03_6621 porin.
  
  
 
0.667
AEB86449.1
Porin; KEGG: ajs:Ajs_3751 porin.
  
  
 
0.661
AEB82837.1
KEGG: ajs:Ajs_3893 hypothetical protein.
  
     0.650
AEB85898.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_2452 porin gram-negative type.
  
  
 
0.650
AEB86934.1
PFAM: Porin, Gram-negative type; KEGG: vei:Veis_0301 porin.
  
  
 
0.650
AEB86592.1
Porin; KEGG: vap:Vapar_4252 porin.
  
  
 
0.631
AEB85858.1
Manually curated; KEGG: pol:Bpro_4383 putative porin precursor transmembrane protein.
  
  
 
0.623
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.