Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB83257.1PFAM: TM1410 hypothetical-related protein; KEGG: ajs:Ajs_0773 polysaccharide deacetylase. (943 aa)    
Predicted Functional Partners:
AEB83256.1
PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-4; KEGG: ajs:Ajs_0772 TPR repeat-containing protein.
 
  
 0.947
AEB83251.1
KEGG: ajs:Ajs_0767 putative transmembrane protein.
 
   
 0.931
AEB83254.1
KEGG: ajs:Ajs_0770 putative transmembrane protein.
 
   
 0.931
AEB83255.1
KEGG: ajs:Ajs_0771 putative lipoprotein.
 
   
 0.931
AEB83253.1
KEGG: ajs:Ajs_0769 putative transmembrane protein.
 
   
 0.929
AEB83252.1
PFAM: Glycosyl transferase, group 1; KEGG: ajs:Ajs_0768 glycosyl transferase, group 1.
 
   
 0.920
AEB83250.1
PFAM: Spherulation-specific family 4; KEGG: ajs:Ajs_0766 hypothetical protein.
 
   
 0.665
AEB83258.1
TIGRFAM: UDP-glucose 4-epimerase; KEGG: ajs:Ajs_0774 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
     0.619
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
       0.450
AEB84570.1
KEGG: maq:Maqu_0130 hypothetical protein.
  
     0.413
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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