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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83332.1SMART: Regulatory protein, FmdB, putative; manually curated; TIGRFAM: Regulatory protein, FmdB, putative; KEGG: dia:Dtpsy_0801 regulatory protein, FmdB family; PFAM: Regulatory protein, FmdB, putative. (93 aa)    
Predicted Functional Partners:
AEB83333.1
PFAM: Protein of unknown function DUF502; KEGG: dia:Dtpsy_0802 protein of unknown function DUF502.
       0.804
AEB83331.1
PFAM: Sodium/solute symporter; KEGG: dia:Dtpsy_0800 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.716
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.603
ubiB
2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
 
     0.587
AEB83329.1
KEGG: dia:Dtpsy_0798 hypothetical protein.
       0.520
AEB83335.1
PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_0805 NUDIX hydrolase.
       0.470
AEB83336.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dia:Dtpsy_0806 endonuclease/exonuclease/phosphatase.
       0.458
AEB83359.1
PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; KEGG: ajs:Ajs_0898 TPR repeat-containing protein.
 
     0.449
AEB84729.1
PFAM: DNA polymerase III chi subunit, HolC; KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit, HolC.
  
     0.449
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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