Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83336.1PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dia:Dtpsy_0806 endonuclease/exonuclease/phosphatase. (253 aa)    
Predicted Functional Partners:
clsB
Phospholipase D/transphosphatidylase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
  
 0.953
AEB83335.1
PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_0805 NUDIX hydrolase.
 
     0.870
AEB84955.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
   0.793
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.672
AEB85744.1
PFAM: Colicin V production, CvpA; Protein of unknown function DUF2474; KEGG: dia:Dtpsy_2227 colicin V production protein.
  
    0.552
AEB83333.1
PFAM: Protein of unknown function DUF502; KEGG: dia:Dtpsy_0802 protein of unknown function DUF502.
       0.508
AEB85745.1
Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_2228 sporulation domain protein.
 
    0.499
AEB83332.1
SMART: Regulatory protein, FmdB, putative; manually curated; TIGRFAM: Regulatory protein, FmdB, putative; KEGG: dia:Dtpsy_0801 regulatory protein, FmdB family; PFAM: Regulatory protein, FmdB, putative.
       0.498
AEB83339.1
BLUF domain protein; PFAM: BLUF; KEGG: dia:Dtpsy_0809 BLUF domain protein.
 
     0.497
AEB85923.1
KEGG: maq:Maqu_3283 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase.
 
  
 0.487
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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