STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83340.1PFAM: Drug/metabolite transporter; KEGG: dia:Dtpsy_0810 protein of unknown function DUF6 transmembrane. (293 aa)    
Predicted Functional Partners:
AEB83341.1
Histidine kinase; KEGG: dar:Daro_2490 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
       0.685
AEB83342.1
Two component transcriptional regulator, LuxR family; KEGG: dar:Daro_2491 LuxR response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal.
       0.685
AEB85611.1
PFAM: Major facilitator superfamily MFS-1; KEGG: dia:Dtpsy_1372 major facilitator superfamily MFS_1.
 
   
 0.568
AEB83339.1
BLUF domain protein; PFAM: BLUF; KEGG: dia:Dtpsy_0809 BLUF domain protein.
  
    0.471
AEB83338.1
KEGG: dia:Dtpsy_0808 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase.
       0.454
AEB84503.1
PFAM: Protein of unknown function DUF349; KEGG: dia:Dtpsy_2041 hypothetical protein.
  
   
 0.439
AEB85952.1
PFAM: Zinc/iron permease; KEGG: dia:Dtpsy_2667 zinc/iron permease.
 
 
 0.433
AEB86120.1
PFAM: Protein of unknown function DUF1330; KEGG: dac:Daci_5107 hypothetical protein.
  
     0.426
AEB83329.1
KEGG: dia:Dtpsy_0798 hypothetical protein.
 
     0.413
AEB83070.1
KEGG: ajs:Ajs_0616 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3.
 
   
 0.406
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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