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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83380.1PFAM: Lactonase, 7-bladed beta propeller; KEGG: dac:Daci_4552 putative hemagglutinin-related protein. (360 aa)    
Predicted Functional Partners:
AEB85361.1
Carbohydrate kinase, thermoresistant glucokinase family; PFAM: Shikimate kinase; manually curated; KEGG: ajs:Ajs_2053 carbohydrate kinase; TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase.
    
 0.908
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
     
 0.902
AEB83382.1
KEGG: dac:Daci_4554 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal.
 
   
 0.849
AEB83381.1
ABC-type transporter, periplasmic subunit family 3; KEGG: dac:Daci_4553 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3.
 
     0.827
AEB83383.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.772
AEB83384.1
KEGG: vap:Vapar_6186 hypothetical protein.
       0.539
AEB82726.1
SMP-30/Gluconolaconase/LRE-like region-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain-containing protein.
  
  
 0.497
AEB84096.1
PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; KEGG: ctt:CtCNB1_3469 outer membrane protein precursor; SMART: SAF domain.
 
    0.492
AEB85555.1
KEGG: bbr:BB0548 LacI family regulatory protein; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI.
 
 
   0.461
AEB85229.1
SMART: SAF domain; TIGRFAM: Galactarate dehydratase; KEGG: ajs:Ajs_1998 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain.
 
    0.458
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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