Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEB83465.1PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2785 protein of unknown function DUF214. (843 aa)    
Predicted Functional Partners:
AEB85208.1
Arylesterase; KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL.
 
 
   0.927
AEB85207.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_1604 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 
 0.827
AEB85907.1
KEGG: ajs:Ajs_3116 secreted hydrolase-like protein.
 
  
 0.816
fdhD
Formate dehydrogenase subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.799
AEB83466.1
KEGG: dia:Dtpsy_2784 hypothetical protein.
       0.793
AEB83467.1
KEGG: ajs:Ajs_3456 hypothetical protein.
 
     0.712
AEB83469.1
PFAM: Globin, truncated bacterial-like; KEGG: ajs:Ajs_3454 globin.
 
     0.670
AEB83462.1
KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit; TIGRFAM: Formate dehydrogenase, gamma subunit; PFAM: Cytochrome b/b6, N-terminal.
       0.561
AEB83463.1
KEGG: dia:Dtpsy_2787 hypothetical protein.
       0.561
AEB83468.1
KEGG: dia:Dtpsy_2782 transcriptional regulator, TraR/DksA family.
       0.543
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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