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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83466.1KEGG: dia:Dtpsy_2784 hypothetical protein. (75 aa)    
Predicted Functional Partners:
AEB83465.1
PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2785 protein of unknown function DUF214.
       0.805
fdhD
Formate dehydrogenase subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.774
AEB83467.1
KEGG: ajs:Ajs_3456 hypothetical protein.
       0.619
AEB83462.1
KEGG: ajs:Ajs_3461 formate dehydrogenase gamma subunit; TIGRFAM: Formate dehydrogenase, gamma subunit; PFAM: Cytochrome b/b6, N-terminal.
       0.562
AEB83463.1
KEGG: dia:Dtpsy_2787 hypothetical protein.
       0.547
AEB83460.1
PFAM: 4Fe-4S binding domain; KEGG: dia:Dtpsy_2790 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.538
AEB83461.1
KEGG: dia:Dtpsy_2789 putative lipoprotein.
       0.526
AEB83469.1
PFAM: Globin, truncated bacterial-like; KEGG: ajs:Ajs_3454 globin.
       0.517
AEB83468.1
KEGG: dia:Dtpsy_2782 transcriptional regulator, TraR/DksA family.
       0.516
AEB83459.1
PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: dia:Dtpsy_2791 molybdopterin oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.470
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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