STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB83514.1KEGG: dia:Dtpsy_0989 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily. (142 aa)    
Predicted Functional Partners:
AEB82922.1
KEGG: ajs:Ajs_0470 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
 
   
 0.644
AEB82918.1
KEGG: dac:Daci_1155 hypothetical protein.
 
     0.629
AEB86945.1
KEGG: dia:Dtpsy_3424 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
     0.620
AEB82916.1
PFAM: AMP-dependent synthetase/ligase; KEGG: dia:Dtpsy_0455 putative phenylacetate-CoA ligase.
 
  
 0.610
AEB84460.1
KEGG: ajs:Ajs_1696 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
 
     0.554
AEB82919.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: ctt:CtCNB1_4327 membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.535
ilvD-2
TIGRFAM: Dihydroxy-acid dehydratase; KEGG: dia:Dtpsy_0988 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
     
 0.490
AEB82921.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dac:Daci_1158 ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
     0.477
AEB82917.1
ABC transporter related protein; KEGG: ctt:CtCNB1_4329 high-affinity branched-chain amino acid transport ATP-binding protein LivF; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
     0.438
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.420
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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