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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83530.1FixH family protein; PFAM: FixH; KEGG: dia:Dtpsy_1005 hypothetical protein. (92 aa)    
Predicted Functional Partners:
AEB83531.1
KEGG: dia:Dtpsy_1006 hypothetical protein.
 
  
 0.891
AEB83529.1
TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: dia:Dtpsy_1004 cytochrome c oxidase accessory protein CcoG.
 
  
 0.788
AEB84036.1
HemY domain protein; PFAM: HemY, N-terminal; KEGG: ajs:Ajs_2893 HemY domain-containing protein.
  
     0.720
AEB83528.1
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.717
AEB82774.1
VanZ family protein; PFAM: VanZ-like; KEGG: ajs:Ajs_0269 VanZ family protein.
  
     0.623
AEB84037.1
PFAM: HemX; KEGG: ajs:Ajs_2892 protein of unknown function DUF513, HemX.
  
     0.623
AEB82894.1
KEGG: ajs:Ajs_0447 hypothetical protein.
  
   
 0.608
AEB82745.1
KEGG: dia:Dtpsy_0229 hypothetical protein.
  
     0.591
AEB83831.1
Hypothetical protein; KEGG: dia:Dtpsy_1110 putative signal peptide protein.
  
     0.587
AEB86233.1
PFAM: Protein of unknown function DUF490; KEGG: ajs:Ajs_3561 hypothetical protein.
  
     0.574
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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