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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83555.1KEGG: reu:Reut_B3884 hypothetical protein. (331 aa)    
Predicted Functional Partners:
AEB86063.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
  
 0.812
AEB83554.1
KEGG: azl:AZL_d00150 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
  
 0.692
AEB83553.1
Formyl-CoA transferase; KEGG: pag:PLES_04421 putative acyl-CoA transferase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.677
AEB83552.1
KEGG: axy:AXYL_06414 3-oxoacyl-[acyl-carrier-protein] reductase 10; PFAM: Short-chain dehydrogenase/reductase SDR.
       0.585
AEB83556.1
KEGG: vap:Vapar_5494 gamma-BHC dehydrochlorinase.
       0.526
AEB86064.1
KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
 
  
 0.499
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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