Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83564.1PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; KEGG: rpc:RPC_1073 hypothetical protein. (134 aa)    
Predicted Functional Partners:
AEB83563.1
KEGG: axy:AXYL_06648 thiolase, C-terminal domain-containing protein 10.
 
 
 0.973
AEB82609.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: ajs:Ajs_0129 thiolase.
 
 
 0.887
AEB86808.1
Thiolase domain-containing protein; PFAM: Thiolase, C-terminal; KEGG: rme:Rmet_5111 thiolase.
 
 
 0.885
AEB83568.1
KEGG: vei:Veis_4266 hypothetical protein.
 
 
 0.880
AEB85560.1
KEGG: bbr:BB0546 acetyl-CoA acetyltransferase.
 
 
 0.876
AEB84221.1
KEGG: reh:H16_A1297 acetyl-CoA acetyltransferase.
 
 
 0.875
AEB82577.1
KEGG: reh:H16_A2148 acetyl-CoA acetyltransferase.
 
 
 0.873
AEB83569.1
PFAM: Domain of unknown function DUF35, OB-fold, C-terminal; Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal; KEGG: bbr:BB4332 hypothetical protein.
 
     0.848
AEB86835.1
Thiolase; KEGG: ajs:Ajs_3972 thiolase.
 
 
 0.845
AEB83565.1
CoA-binding domain protein; KEGG: reu:Reut_B4556 CoA-binding; PFAM: CoA-binding; SMART: CoA-binding.
  
    0.791
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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