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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83606.1KEGG: dia:Dtpsy_2532 aminotransferase class I and II. (328 aa)    
Predicted Functional Partners:
hisB
KEGG: dia:Dtpsy_0730 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase.
  
 
 0.978
AEB84353.1
KEGG: dia:Dtpsy_1393 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase.
  
 
 0.974
AEB84354.1
Chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; KEGG: dia:Dtpsy_1394 chorismate mutase; SMART: Chorismate mutase.
  
 
 0.955
AEB84758.1
Aspartate transaminase; KEGG: ajs:Ajs_2151 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/classII.
   
 
 0.921
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.920
AEB85502.1
KEGG: rso:RSp1232 aspartate aminotransferase A protein; PFAM: Aminotransferase, class I/classII.
  
 
 0.912
AEB83007.1
TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: ajs:Ajs_0520 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.910
hisC-2
TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: vap:Vapar_1479 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 
0.908
AEB83008.1
TIGRFAM: Phenylalanine-4-hydroxylase, monomeric form; KEGG: dia:Dtpsy_0534 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal.
     
 0.907
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.907
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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