Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83620.1KEGG: aav:Aave_1570 globin-like protein. (123 aa)    
Predicted Functional Partners:
AEB83621.1
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.821
AEB83622.1
KEGG: dia:Dtpsy_2510 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2.
 
  
 0.709
AEB83151.1
PFAM: DSBA-like thioredoxin domain; KEGG: ajs:Ajs_0654 DsbA oxidoreductase.
  
  
 0.451
AEB86183.1
PFAM: DSBA-like thioredoxin domain; KEGG: bpl:BURPS1106A_A3104 thioredoxin domain-containing protein.
  
  
 0.451
AEB83089.1
KEGG: dia:Dtpsy_0618 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; SMART: Heat shock protein DnaJ, N-terminal.
  
   0.427
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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