Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83625.1SpoVR family protein; PFAM: Sporulation stage V, protein R; KEGG: dac:Daci_2329 SpoVR family protein. (543 aa)    
Predicted Functional Partners:
AEB83624.1
UPF0229 protein yeaH; KEGG: dac:Daci_2328 hypothetical protein; HAMAP: Uncharacterised protein family UPF0229; PFAM: Uncharacterised protein family UPF0229; Belongs to the UPF0229 family.
 
  
 0.995
AEB83623.1
KEGG: ctt:CtCNB1_1949 putative serine protein kinase, PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA.
 
  
 0.994
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.777
AEB84769.1
PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB.
   
  
 0.637
AEB85338.1
Lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
   
  
 0.577
AEB82477.1
PFAM: Nucleoside recognition; KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein.
  
  
 0.549
AEB83733.1
KEGG: dia:Dtpsy_2563 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc.
   
    0.438
AEB87006.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
   
    0.407
AEB86709.1
Carboxylate-amine ligase ybdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
  
    0.401
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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