Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83638.1KEGG: bbr:BB0464 putative dehydratase/racemase; Belongs to the CoA-transferase III family. (415 aa)    
Predicted Functional Partners:
AEB83917.1
KEGG: bbr:BB0622 hypothetical protein.
 
 
  0.941
AEB82590.1
KEGG: dia:Dtpsy_0137 hypothetical protein.
 
 
  0.937
AEB83637.1
KEGG: gpb:HDN1F_16010 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain.
  
 
  0.692
AEB83635.1
KEGG: rme:Rmet_5425 putative butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
  
 
  0.598
AEB83636.1
KEGG: dac:Daci_1885 CoA-binding domain-containing protein; PFAM: CoA-binding; SMART: CoA-binding.
       0.489
AEB83644.1
L-lactate dehydrogenase (cytochrome); KEGG: ajs:Ajs_3298 (S)-2-hydroxy-acid oxidase; PFAM: FMN-dependent dehydrogenase.
  
 
  0.452
AEB83633.1
KEGG: vap:Vapar_4821 hypothetical protein.
  
    0.423
AEB86953.1
KEGG: pzu:PHZ_c2530 hypothetical protein.
 
 
 0.421
AEB83634.1
PFAM: Asparaginase/glutaminase; KEGG: axy:AXYL_04759 L-asparaginase 1; SMART: Asparaginase/glutaminase.
       0.416
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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