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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83690.1PFAM: Mechanosensitive ion channel MscS; KEGG: ajs:Ajs_3252 small-conductance mechanosensitive channel-like protein. (220 aa)    
Predicted Functional Partners:
lysS
TIGRFAM: Lysyl-tRNA synthetase, class II; KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.832
AEB83697.1
Acetyltransferase; KEGG: bpt:Bpet1526 acetyltransferase.
     
 0.670
AEB84931.1
PFAM: Protein of unknown function DUF2242; KEGG: dia:Dtpsy_2310 putative lipoprotein.
  
     0.670
AEB83700.1
PFAM: Peptidase S16, lon N-terminal; KEGG: xtr:100498456 hypothetical protein LOC100498456.
 
    0.669
AEB83695.1
PFAM: Glycosyl transferase, family 2; KEGG: bpt:Bpet1524 glycosyltransferase.
     
 0.665
AEB84938.1
KEGG: dia:Dtpsy_2324 calcium-binding EF-hand-containing protein.
 
     0.665
AEB83692.1
PFAM: Bacterial sugar transferase; KEGG: lch:Lcho_0300 sugar transferase.
       0.660
AEB83698.1
PFAM: Polysaccharide biosynthesis protein; KEGG: bpt:Bpet1527 hypothetical protein.
     
 0.659
AEB83696.1
PFAM: Glycosyl transferase, group 1; KEGG: bpt:Bpet1525 glycosyltransferase.
     
 0.658
AEB83693.1
Glutamine--scyllo-inositol transaminase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.654
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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