Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83752.1ABC-type transporter, periplasmic subunit family 3; KEGG: lch:Lcho_4024 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3. (296 aa)    
Predicted Functional Partners:
AEB83067.1
Polar amino acid ABC transporter, inner membrane subunit; KEGG: ctt:CtCNB1_4180 glutamate/aspartate transport systempermease protein GltK; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.850
AEB83066.1
KEGG: dia:Dtpsy_0589 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.849
AEB83068.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0591 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.841
AEB85584.1
KEGG: dac:Daci_4388 polar amino acid ABC transporter inner membrane protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.787
AEB85583.1
KEGG: ctt:CtCNB1_1867 amino acid ABC transporter, permease protein PEB1; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.776
AEB83228.1
KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.737
AEB84086.1
KEGG: pol:Bpro_1039 amino acid ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.732
AEB84087.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: pol:Bpro_1038 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.723
AEB85887.1
KEGG: rso:RSc3409 amino-acid transmembrane ABC transporter protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 0.723
AEB85888.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: rso:RSc3408 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core.
 
 
 0.722
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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