STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83767.1NosL family protein; PFAM: Nitrous oxide reductase accessory protein NosL; KEGG: dia:Dtpsy_1055 NosL family protein. (178 aa)    
Predicted Functional Partners:
AEB83770.1
TIGRFAM: Parallel beta-helix repeat-2; PFAM: Periplasmic copper-binding; Domain of unknown function DUF1565; KEGG: dia:Dtpsy_1058 periplasmic copper-binding; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat.
 
  
 0.990
AEB83768.1
KEGG: dia:Dtpsy_1056 ABC-2 type transporter.
 
  
 0.988
AEB83771.1
Nitrous oxide expression regulator, NosR; KEGG: dia:Dtpsy_1059 FMN-binding domain protein; PFAM: FMN-binding; SMART: FMN-binding.
 
  
 0.981
AEB83769.1
Sulfate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_1057 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
  
 0.962
AEB83772.1
KEGG: ajs:Ajs_1139 nitrous-oxide reductase; PFAM: Cytochrome c oxidase subunit II C-terminal.
 
  
 0.956
AEB83766.1
NosL family protein; PFAM: Nitrous oxide reductase accessory protein NosL; KEGG: dia:Dtpsy_1054 hypothetical protein.
 
     0.837
AEB85976.1
NnrS family protein; PFAM: NnrS; KEGG: dia:Dtpsy_2680 NnrS family protein.
 
     0.617
AEB85979.1
KEGG: dia:Dtpsy_2687 putative periplasmic component of ABC-type transport system.
  
   
 0.610
AEB83720.1
PFAM: Peptidase U32; KEGG: ajs:Ajs_3221 peptidase U32.
 
    0.590
AEB83719.1
PFAM: SCP2 sterol-binding domain; KEGG: ajs:Ajs_3222 hypothetical protein.
 
  
 0.548
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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