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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83785.1KEGG: xtr:100495621 UPF0065 protein in clcB-clcD intergenic region-like. (183 aa)    
Predicted Functional Partners:
AEB83784.1
KEGG: vei:Veis_2284 hypothetical protein.
 
     0.935
AEB83782.1
KEGG: dia:Dtpsy_1069 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain.
 
     0.823
AEB83783.1
PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; KEGG: vei:Veis_2283 signal transduction histidine kinase, LytS.
 
     0.809
AEB83165.1
KEGG: ajs:Ajs_0668 putative general secretory pathway N transmembrane protein.
  
     0.641
AEB83167.1
PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L.
  
     0.635
AEB83780.1
PFAM: Major facilitator superfamily MFS-1; KEGG: dia:Dtpsy_1068 major facilitator superfamily MFS_1.
 
     0.618
AEB84804.1
ZipA FtsZ-binding region protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.609
AEB83171.1
KEGG: dia:Dtpsy_0653 general secretion pathway protein H; manually curated; TIGRFAM: Bacterial general secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal.
  
     0.578
AEB83169.1
KEGG: ajs:Ajs_0672 hypothetical protein.
  
     0.574
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.520
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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