Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83826.1KEGG: dia:Dtpsy_1105 polysaccharide deacetylase; manually curated; PFAM: Polysaccharide deacetylase. (267 aa)    
Predicted Functional Partners:
AEB83825.1
KEGG: dia:Dtpsy_1104 hypothetical protein.
 
   
 0.936
AEB83827.1
PFAM: Fatty acid hydroxylase; KEGG: dia:Dtpsy_1106 fatty acid hydroxylase.
 
     0.922
AEB83828.1
Protein of unknown function DUF540; PFAM: Uncharacterised protein family CysZ; KEGG: dia:Dtpsy_1107 putative transmembrane protein.
 
    0.728
AEB83829.1
KEGG: ajs:Ajs_1188 molybdopterin binding domain-containing protein; PFAM: Molybdopterin binding; SMART: Molybdopterin binding.
     
 0.669
AEB82549.1
PFAM: Cupin 2, conserved barrel; KEGG: aav:Aave_0177 cupin 2 domain-containing protein.
 
   
 0.634
AEB83824.1
Pseudouridine synthase Rsu; KEGG: ajs:Ajs_1183 ribosomal small subunit pseudouridine synthase A; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; Belongs to the pseudouridine synthase RsuA family.
     
 0.581
AEB83169.1
KEGG: ajs:Ajs_0672 hypothetical protein.
  
     0.506
AEB86614.1
KEGG: dia:Dtpsy_3161 hypothetical protein.
  
     0.472
AEB83454.1
Hypothetical protein; Manually curated; KEGG: dia:Dtpsy_2796 hypothetical protein.
  
     0.456
AEB83830.1
TIGRFAM: Glutamine synthetase type I; KEGG: aav:Aave_1442 L-glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp.
     
 0.434
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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