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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83851.1KEGG: ajs:Ajs_1201 amine oxidase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase. (430 aa)    
Predicted Functional Partners:
AEB83853.1
TIGRFAM: Squalene/phytoene synthase HpnD; KEGG: dia:Dtpsy_1121 squalene synthase HpnD; PFAM: Squalene/phytoene synthase.
 
  
 0.811
AEB83854.1
KEGG: dia:Dtpsy_1124 squalene synthase HpnC; TIGRFAM: Squalene synthase HpnC; PFAM: Squalene/phytoene synthase.
 
  
 0.801
AEB83850.1
PFAM: Protein of unknown function DUF2868; Protein of unknown function DUF3482; KEGG: pna:Pnap_2063 hypothetical protein.
       0.752
AEB83677.1
KEGG: dia:Dtpsy_2621 putative transmembrane protein.
  
     0.672
AEB82892.1
KEGG: dia:Dtpsy_0436 hemerythrin HHE cation binding domain protein.
  
     0.657
AEB86390.1
KEGG: dia:Dtpsy_2992 hypothetical protein.
 
     0.600
AEB82745.1
KEGG: dia:Dtpsy_0229 hypothetical protein.
  
     0.593
AEB84523.1
KEGG: ajs:Ajs_2549 hypothetical protein.
  
     0.580
AEB83831.1
Hypothetical protein; KEGG: dia:Dtpsy_1110 putative signal peptide protein.
  
     0.577
AEB84036.1
HemY domain protein; PFAM: HemY, N-terminal; KEGG: ajs:Ajs_2893 HemY domain-containing protein.
  
     0.544
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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