STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83866.1Alpha-methylacyl-CoA racemase; KEGG: bbr:BB0593 CaiB/BaiF family protein; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (386 aa)    
Predicted Functional Partners:
AEB83865.1
Formyl-CoA transferase; KEGG: bur:Bcep18194_B2644 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
 
    
0.823
AEB83869.1
PFAM: Nitroreductase-like; KEGG: bbr:BB0596 nitroreductase family protein.
 
  
 0.820
AEB83870.1
PFAM: Crotonase, core; KEGG: bbr:BB0597 enoyl-CoA hydratase/isomerase family protein.
    
 0.761
AEB83867.1
KEGG: bbr:BB0594 hypothetical protein.
  
    0.748
AEB83868.1
KEGG: bbr:BB0595 hypothetical protein.
       0.746
AEB83863.1
PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_C7289 MaoC-like dehydratase.
    
 0.625
AEB83864.1
KEGG: bur:Bcep18194_C7290 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
  
 
  0.616
AEB83862.1
Citryl-CoA lyase; KEGG: bbr:BB0589 hypothetical protein; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.551
AEB84629.1
KEGG: ajs:Ajs_2522 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.509
AEB83871.1
PFAM: Extracellular ligand-binding receptor; KEGG: bbr:BB0598 extracellular ligand binding protein.
       0.433
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.