Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB83870.1PFAM: Crotonase, core; KEGG: bbr:BB0597 enoyl-CoA hydratase/isomerase family protein. (256 aa)    
Predicted Functional Partners:
AEB83865.1
Formyl-CoA transferase; KEGG: bur:Bcep18194_B2644 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
    
 0.792
AEB83866.1
Alpha-methylacyl-CoA racemase; KEGG: bbr:BB0593 CaiB/BaiF family protein; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
    
 0.792
AEB83520.1
PFAM: Crotonase, core; KEGG: ajs:Ajs_1079 enoyl-CoA hydratase/isomerase.
  
     0.774
AEB83867.1
KEGG: bbr:BB0594 hypothetical protein.
       0.773
AEB83868.1
KEGG: bbr:BB0595 hypothetical protein.
       0.773
AEB83869.1
PFAM: Nitroreductase-like; KEGG: bbr:BB0596 nitroreductase family protein.
       0.773
AEB84249.1
Enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; KEGG: bpt:Bpet1158 putative enoyl-CoA hydratase/isomerase.
  
     0.772
AEB82943.1
KEGG: ajs:Ajs_3718 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal.
 0.763
AEB83864.1
KEGG: bur:Bcep18194_C7290 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
  
 0.752
AEB83863.1
PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_C7289 MaoC-like dehydratase.
  
 0.712
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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