Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB83885.1Formyl-CoA transferase; KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (410 aa)    
Predicted Functional Partners:
AEB83886.1
KEGG: reu:Reut_A1831 hypothetical protein.
  
    0.775
AEB83884.1
Formyl-CoA transferase; KEGG: reu:Reut_A1830 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
 
    
0.709
AEB83890.1
PFAM: MaoC-like dehydratase; KEGG: reu:Reut_A1834 MaoC-like dehydratase.
  
 
 0.607
AEB83891.1
KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
  
 
  0.592
AEB83883.1
Hypothetical protein.
       0.570
AEB83887.1
Propanoyl-CoA C-acyltransferase; KEGG: eba:ebA306 lipid-transfer protein; PFAM: Beta-ketoacyl synthase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.523
AEB83889.1
PFAM: Protein of unknown function DUF1446; KEGG: sth:STH1574 hypothetical protein.
  
    0.517
AEB83888.1
KEGG: bbt:BBta_2933 hypothetical protein.
       0.512
AEB84247.1
KEGG: bpt:Bpet1156 hypothetical protein.
 
 
 0.462
AEB83428.1
Acetolactate synthase; KEGG: ajs:Ajs_3488 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
 
 
 0.447
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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