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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83888.1KEGG: bbt:BBta_2933 hypothetical protein. (113 aa)    
Predicted Functional Partners:
AEB83889.1
PFAM: Protein of unknown function DUF1446; KEGG: sth:STH1574 hypothetical protein.
     0.961
AEB85377.1
PFAM: Protein of unknown function DUF1446; KEGG: dia:Dtpsy_1910 protein of unknown function DUF1446.
     0.857
AEB84256.1
PFAM: Protein of unknown function DUF1446; KEGG: bpt:Bpet1151 hypothetical protein.
     0.823
AEB86828.1
PFAM: Protein of unknown function DUF1446; KEGG: ctt:CtCNB1_4655 NAD-dependent aldehyde dehydrogenase.
     0.813
AEB83890.1
PFAM: MaoC-like dehydratase; KEGG: reu:Reut_A1834 MaoC-like dehydratase.
       0.773
AEB83887.1
Propanoyl-CoA C-acyltransferase; KEGG: eba:ebA306 lipid-transfer protein; PFAM: Beta-ketoacyl synthase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
       0.765
AEB83891.1
KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
       0.747
AEB83885.1
Formyl-CoA transferase; KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.513
AEB83886.1
KEGG: reu:Reut_A1831 hypothetical protein.
       0.497
AEB83892.1
Hypothetical protein.
       0.466
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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