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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83890.1PFAM: MaoC-like dehydratase; KEGG: reu:Reut_A1834 MaoC-like dehydratase. (166 aa)    
Predicted Functional Partners:
AEB83891.1
KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
 
 0.856
AEB83887.1
Propanoyl-CoA C-acyltransferase; KEGG: eba:ebA306 lipid-transfer protein; PFAM: Beta-ketoacyl synthase, C-terminal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.839
AEB83889.1
PFAM: Protein of unknown function DUF1446; KEGG: sth:STH1574 hypothetical protein.
  
 
 0.805
AEB83888.1
KEGG: bbt:BBta_2933 hypothetical protein.
       0.773
AEB82901.1
KEGG: cti:RALTA_B1741 hypothetical protein.
  
     0.765
AEB82903.1
PFAM: MaoC-like dehydratase; KEGG: cti:RALTA_B1743 hypothetical protein.
  
     0.763
AEB82686.1
PFAM: MaoC-like dehydratase; KEGG: dac:Daci_0013 dehydratase.
  
     0.759
AEB82934.1
KEGG: ctt:CtCNB1_2196 hypothetical protein.
  
     0.639
AEB83885.1
Formyl-CoA transferase; KEGG: bur:Bcep18194_C7488 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
    
 0.586
AEB84046.1
Catalase; KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; Belongs to the catalase family.
   
 0.585
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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