STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83918.1Formyl-CoA transferase; KEGG: bur:Bcep18194_C7301 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (399 aa)    
Predicted Functional Partners:
AEB82903.1
PFAM: MaoC-like dehydratase; KEGG: cti:RALTA_B1743 hypothetical protein.
    
 0.917
AEB83444.1
PFAM: MaoC-like dehydratase; KEGG: bpt:Bpet0844 hypothetical protein.
    
 0.917
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
  0.913
sucC
succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
   
  0.913
AEB82689.1
KEGG: axy:AXYL_02637 CoA-transferase family III family protein 17; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
  
 
0.902
AEB82588.1
Formyl-CoA transferase; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
  
 
0.901
AEB82627.1
Formyl-CoA transferase; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
  
 
0.901
AEB83917.1
KEGG: bbr:BB0622 hypothetical protein.
 
  
 0.881
AEB83919.1
HpcH/HpaI aldolase; PFAM: Aldehyde-lyase domain; KEGG: bur:Bcep18194_C7302 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.833
AEB83914.1
KEGG: bur:Bcep18194_C7297 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
 
 
  0.792
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.