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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83922.1ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: jan:Jann_2266 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (297 aa)    
Predicted Functional Partners:
AEB83923.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: jan:Jann_2267 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
AEB83921.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: jan:Jann_2265 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 0.967
AEB83924.1
PFAM: Extracellular ligand-binding receptor; KEGG: jan:Jann_2263 extracellular ligand-binding receptor.
 
  
 0.934
AEB83920.1
KEGG: jan:Jann_2264 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
  
 0.921
AEB83936.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dac:Daci_0260 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.878
AEB86018.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2712 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.878
AEB82734.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: bav:BAV0982 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.876
AEB83688.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2607 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.869
AEB86016.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2710 ABC transporter related; SMART: ATPase, AAA+ type, core.
  
 0.867
AEB85427.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: axy:AXYL_02568 inner-membrane translocator 30; Belongs to the binding-protein-dependent transport system permease family.
  
 0.866
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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