STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB83927.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AEB83926.1
PFAM: Aldehyde dehydrogenase domain; KEGG: bur:Bcep18194_C6756 aldehyde dehydrogenase (acceptor).
       0.773
AEB83925.1
L-iditol 2-dehydrogenase; KEGG: bur:Bcep18194_C7304 zinc-containing alcohol dehydrogenase superfamily protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like.
       0.732
AEB83924.1
PFAM: Extracellular ligand-binding receptor; KEGG: jan:Jann_2263 extracellular ligand-binding receptor.
       0.520
AEB83928.1
KEGG: bbr:BB0625 hypothetical protein.
       0.455
AEB83929.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: bpa:BPP0622 hypothetical protein.
       0.420
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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